Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05100 | Not Available | Negative | 1235442 - 1235627 | 7336.93 |
| hypothetical protein | DXC44_05105 | Not Available | Negative | 1235639 - 1235995 | 13490.6 |
| hypothetical protein | DXC44_05110 | Not Available | Positive | 1236214 - 1237197 | 37820.1 |
| hypothetical protein | DXC44_05115 | Not Available | Positive | 1237191 - 1237973 | 29692.1 |
| serine/threonine protein phosphatase | DXC44_05120 | Not Available | Positive | 1237970 - 1238734 | 29277.5 |
| adenine methyltransferase | DXC44_05125 | Not Available | Negative | 1238819 - 1239310 | 18422.0 |
| hypothetical protein | DXC44_05130 | Not Available | Negative | 1239317 - 1239772 | 16514.4 |
| hypothetical protein | DXC44_05135 | Not Available | Negative | 1239776 - 1241128 | 49352.7 |
| hypothetical protein | DXC44_05140 | Not Available | Negative | 1241128 - 1241475 | 12328.3 |
| hypothetical protein | DXC44_05145 | Not Available | Negative | 1241551 - 1242600 | 39626.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

