Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05050 | Not Available | Negative | 1216509 - 1216802 | 11005.0 |
| hypothetical protein | DXC44_05055 | Not Available | Negative | 1216852 - 1221618 | 165928.0 |
| hypothetical protein | DXC44_05060 | Not Available | Negative | 1221754 - 1223064 | 45497.6 |
| hypothetical protein | DXC44_05065 | Not Available | Negative | 1223069 - 1225339 | 83919.3 |
| hypothetical protein | DXC44_05070 | Not Available | Negative | 1225343 - 1227031 | 60863.4 |
| hypothetical protein | DXC44_05075 | Not Available | Negative | 1227028 - 1227918 | 32297.1 |
| tir domain-containing protein | DXC44_05080 | Not Available | Positive | 1227988 - 1229190 | 46241.4 |
| hypothetical protein | DXC44_05085 | Not Available | Negative | 1229200 - 1230525 | 49096.5 |
| hypothetical protein | DXC44_05090 | Not Available | Negative | 1230516 - 1231493 | 36779.1 |
| phage tail tape measure protein | DXC44_05095 | Not Available | Negative | 1231506 - 1235348 | 139927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

