Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc family atpase | DXC44_05000 | Not Available | Negative | 1204843 - 1207167 | 86829.1 |
| phosphoesterase | DXC44_05005 | Not Available | Negative | 1207155 - 1208222 | 40273.8 |
| hypothetical protein | DXC44_05010 | Not Available | Negative | 1208297 - 1209556 | 47813.1 |
| hypothetical protein | DXC44_05015 | Not Available | Negative | 1209838 - 1210332 | 19796.3 |
| hypothetical protein | DXC44_05020 | Not Available | Negative | 1210447 - 1213029 | 93756.3 |
| hypothetical protein | DXC44_05025 | Not Available | Negative | 1213026 - 1213592 | 22490.0 |
| hypothetical protein | DXC44_05030 | Not Available | Negative | 1213582 - 1214475 | 32932.9 |
| hypothetical protein | DXC44_05035 | Not Available | Negative | 1214472 - 1215404 | 34975.8 |
| hypothetical protein | DXC44_05040 | Not Available | Negative | 1215397 - 1216077 | 24759.0 |
| rna-binding protein | DXC44_05045 | Not Available | Negative | 1216186 - 1216509 | 12505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

