Bacteroides uniformis strain TF08-13

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain TF08-13 is a Gram-negative, rod-shaped bacterium that inhabits the gastrointestinal tract of Homo sapiens. This strain is characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. An important feature of Bacteroides uniformis strain TF08-13 is its possession of flagella, which may facilitate its motility within the complex environment of the gut. The strain is defined by having a single replicon, which is a characteristic of its genomic organization. Bacteroides uniformis has been associated with health effects related to intestinal inflammation. This suggests that the presence or activity of this strain may influence gut health and could be relevant in the context of inflammatory intestinal conditions. The habitat of Bacteroides uniformis strain TF08-13 underscores its ecological role within the human gut microbiota. As part of this diverse microbial community, it likely contributes to the maintenance of gut homeostasis and may interact with other microbial species, influencing overall gut health and disease states. Understanding the specific roles and impacts of strains like Bacteroides uniformis can provide insights into their potential implications for human health, particularly in relation to gastrointestinal disorders.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain TF08-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain TF08-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain TF08-13 TF08-13.Scaf71, whole genome

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1224022 bp

Guanine Count

1050112 bp

Cytosine Count

1106368 bp

Genome Length

4644724 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidinol-phosphatase hisj family proteinDXC80_00390Not AvailableNegative85703 - 8654532355.1
abc transporter atp-binding proteinDXC80_00395Not AvailableNegative86590 - 8847973219.0
duf3805 domain-containing proteinDXC80_00400Not AvailableNegative88543 - 8934930500.0
susd/ragb family nutrient-binding outer membrane lipoproteinDXC80_00405Not AvailableNegative89681 - 9152868478.2
susc/raga family tonb-linked outer membrane proteinDXC80_00410Not AvailableNegative91550 - 94759117038.0
hypothetical proteinDXC80_00420Not AvailableNegative95574 - 9677045213.3
dna-binding response regulatorDXC80_00425Not AvailablePositive97058 - 9774726174.7
two-component sensor histidine kinaseDXC80_00430Not AvailablePositive97722 - 9951569070.9
tryptophanaseDXC80_00435Not AvailablePositive100317 - 10169051988.3
siderophore biosynthesis proteinDXC80_00440Not AvailableNegative101696 - 10232524295.2

Displaying genes 81 – 90 of 3823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total