Bacteroides uniformis strain TF08-13

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain TF08-13 is a Gram-negative, rod-shaped bacterium that inhabits the gastrointestinal tract of Homo sapiens. This strain is characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. An important feature of Bacteroides uniformis strain TF08-13 is its possession of flagella, which may facilitate its motility within the complex environment of the gut. The strain is defined by having a single replicon, which is a characteristic of its genomic organization. Bacteroides uniformis has been associated with health effects related to intestinal inflammation. This suggests that the presence or activity of this strain may influence gut health and could be relevant in the context of inflammatory intestinal conditions. The habitat of Bacteroides uniformis strain TF08-13 underscores its ecological role within the human gut microbiota. As part of this diverse microbial community, it likely contributes to the maintenance of gut homeostasis and may interact with other microbial species, influencing overall gut health and disease states. Understanding the specific roles and impacts of strains like Bacteroides uniformis can provide insights into their potential implications for human health, particularly in relation to gastrointestinal disorders.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain TF08-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain TF08-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain TF08-13 TF08-13.Scaf71, whole genome

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1224022 bp

Guanine Count

1050112 bp

Cytosine Count

1106368 bp

Genome Length

4644724 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rtec proteinDXC80_13700Not AvailableNegative3330182 - 333079923879.9
deaminaseDXC80_13705Not AvailableNegative3331010 - 333142315780.2
sigma-54-dependent fis family transcriptional regulatorDXC80_13710Not AvailableNegative3331703 - 333302549941.4
hybrid sensor histidine kinase/response regulatorDXC80_13715Not AvailableNegative3333018 - 333533688209.6
tetracycline resistance ribosomal protection proteinDXC80_13720Not AvailableNegative3335336 - 333726171991.4
23s rrna (adenine(2058)-n(6))-methyltransferase erm(f)DXC80_13725Not AvailableNegative3337548 - 333834830309.3
is982 family transposase is1187DXC80_13730Not AvailablePositive3338388 - 333936837555.5
gnat family n-acetyltransferaseDXC80_13735Not AvailableNegative3339843 - 334070032371.6
nuclear transport factor 2 family proteinDXC80_13740Not AvailableNegative3340712 - 334108914256.0
duf418 domain-containing proteinDXC80_13745Not AvailablePositive3341178 - 334148611933.8

Displaying genes 2681 – 2690 of 3823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total