Bacteroides uniformis strain TF08-13

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain TF08-13 is a Gram-negative, rod-shaped bacterium that inhabits the gastrointestinal tract of Homo sapiens. This strain is characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. An important feature of Bacteroides uniformis strain TF08-13 is its possession of flagella, which may facilitate its motility within the complex environment of the gut. The strain is defined by having a single replicon, which is a characteristic of its genomic organization. Bacteroides uniformis has been associated with health effects related to intestinal inflammation. This suggests that the presence or activity of this strain may influence gut health and could be relevant in the context of inflammatory intestinal conditions. The habitat of Bacteroides uniformis strain TF08-13 underscores its ecological role within the human gut microbiota. As part of this diverse microbial community, it likely contributes to the maintenance of gut homeostasis and may interact with other microbial species, influencing overall gut health and disease states. Understanding the specific roles and impacts of strains like Bacteroides uniformis can provide insights into their potential implications for human health, particularly in relation to gastrointestinal disorders.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain TF08-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain TF08-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain TF08-13 TF08-13.Scaf71, whole genome

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1224022 bp

Guanine Count

1050112 bp

Cytosine Count

1106368 bp

Genome Length

4644724 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4301 family proteinDXC80_09870Not AvailablePositive2430359 - 243187656466.5
formate-dependent phosphoribosylglycinamide formyltransferaseDXC80_09875Not AvailablePositive2432015 - 243318143155.9
hypothetical proteinDXC80_09880Not AvailableNegative2433251 - 243374518533.2
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseDXC80_09885Not AvailableNegative2433829 - 243466230892.1
replicative dna helicaseDXC80_09890Not AvailablePositive2434960 - 243653157985.3
translocation/assembly module tambDXC80_09895Not AvailableNegative2436689 - 2441161168165.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadDXC80_09900Not AvailablePositive2441366 - 244238836753.3
cina family proteinDXC80_09905Not AvailablePositive2442402 - 244286916211.7
50s ribosomal protein l28DXC80_09910Not AvailablePositive2442991 - 24432519759.05
50s ribosomal protein l33DXC80_09915Not AvailablePositive2443272 - 24434607211.91

Displaying genes 1931 – 1940 of 3823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total