Bacteroides uniformis strain TF08-13

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain TF08-13 is a Gram-negative, rod-shaped bacterium that inhabits the gastrointestinal tract of Homo sapiens. This strain is characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. An important feature of Bacteroides uniformis strain TF08-13 is its possession of flagella, which may facilitate its motility within the complex environment of the gut. The strain is defined by having a single replicon, which is a characteristic of its genomic organization. Bacteroides uniformis has been associated with health effects related to intestinal inflammation. This suggests that the presence or activity of this strain may influence gut health and could be relevant in the context of inflammatory intestinal conditions. The habitat of Bacteroides uniformis strain TF08-13 underscores its ecological role within the human gut microbiota. As part of this diverse microbial community, it likely contributes to the maintenance of gut homeostasis and may interact with other microbial species, influencing overall gut health and disease states. Understanding the specific roles and impacts of strains like Bacteroides uniformis can provide insights into their potential implications for human health, particularly in relation to gastrointestinal disorders.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain TF08-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain TF08-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain TF08-13 TF08-13.Scaf71, whole genome

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1224022 bp

Guanine Count

1050112 bp

Cytosine Count

1106368 bp

Genome Length

4644724 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susf/suse family outer membrane proteinDXC80_09770Not AvailablePositive2399459 - 240095555380.0
cycloisomaltooligosaccharide glucanotransferaseDXC80_09775Not AvailablePositive2400969 - 240277467134.1
duf4968 domain-containing proteinDXC80_09780Not AvailablePositive2402809 - 240530795800.7
glycoside hydrolase family 97 proteinDXC80_09785Not AvailablePositive2405329 - 240748281137.6
long-chain fatty acid--coa ligaseDXC80_09790Not AvailableNegative2407826 - 240949362926.4
potassium/proton antiporterDXC80_09795Not AvailableNegative2409609 - 241106052939.7
ghkl domain-containing proteinDXC80_09800Not AvailableNegative2411155 - 241246248996.0
sigma-54-dependent fis family transcriptional regulatorDXC80_09805Not AvailableNegative2412452 - 241382250901.7
hypothetical proteinDXC80_09810Not AvailableNegative2414067 - 241480429031.7
metallophosphoesteraseDXC80_09815Not AvailableNegative2414779 - 241558531549.1

Displaying genes 1911 – 1920 of 3823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total