Bacteroides uniformis strain TF08-13

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain TF08-13 is a Gram-negative, rod-shaped bacterium that inhabits the gastrointestinal tract of Homo sapiens. This strain is characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen, specifically within the gut luminal niche of the intestinal tract. An important feature of Bacteroides uniformis strain TF08-13 is its possession of flagella, which may facilitate its motility within the complex environment of the gut. The strain is defined by having a single replicon, which is a characteristic of its genomic organization. Bacteroides uniformis has been associated with health effects related to intestinal inflammation. This suggests that the presence or activity of this strain may influence gut health and could be relevant in the context of inflammatory intestinal conditions. The habitat of Bacteroides uniformis strain TF08-13 underscores its ecological role within the human gut microbiota. As part of this diverse microbial community, it likely contributes to the maintenance of gut homeostasis and may interact with other microbial species, influencing overall gut health and disease states. Understanding the specific roles and impacts of strains like Bacteroides uniformis can provide insights into their potential implications for human health, particularly in relation to gastrointestinal disorders.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain TF08-13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain TF08-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain TF08-13 TF08-13.Scaf71, whole genome

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1224022 bp

Guanine Count

1050112 bp

Cytosine Count

1106368 bp

Genome Length

4644724 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peroxiredoxinDXC80_07085Not AvailablePositive1730205 - 173077121122.2
alkyl hydroperoxide reductase subunit fDXC80_07090Not AvailablePositive1730985 - 173254456249.4
s46 family peptidaseDXC80_07095Not AvailableNegative1732583 - 173472181151.1
tigr00341 family proteinDXC80_07100Not AvailableNegative1734738 - 173610850824.6
dna damage-inducible protein dDXC80_07105Not AvailableNegative1736125 - 173679625149.3
lipopolysaccharide biosynthesis proteinDXC80_07110Not AvailableNegative1736974 - 173841654308.5
holliday junction branch migration dna helicase ruvbDXC80_07115Not AvailableNegative1738466 - 173950338135.6
adp-ribosylglycohydrolase family proteinDXC80_07120Not AvailableNegative1739745 - 174127157342.3
ragb/susd family nutrient uptake outer membrane proteinDXC80_07125Not AvailableNegative1741307 - 174287860169.1
tonb-dependent receptorDXC80_07130Not AvailableNegative1742887 - 1745841109441.0

Displaying genes 1391 – 1400 of 3823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total