Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl synthetase family protein | DXD04_00340 | Not Available | + | 89645 - 90619 | 35663.0 |
| deoxyribose-phosphate aldolase | DXD04_00345 | Not Available | - | 90686 - 91627 | 34698.1 |
| pyrophosphatase | DXD04_00350 | Not Available | - | 91633 - 91953 | 12201.5 |
| d-tyrosyl-trna(tyr) deacylase | DXD04_00355 | Not Available | - | 91956 - 92408 | 16557.1 |
| excinuclease abc subunit uvrc | DXD04_00360 | Not Available | - | 92442 - 94274 | 70246.4 |
| adenine phosphoribosyltransferase | DXD04_00365 | Not Available | - | 94380 - 94904 | 19287.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DXD04_00370 | Not Available | - | 94962 - 96833 | 69573.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 97125 - 97487 | Not Available |
| rrna maturation rnase ybey | DXD04_00375 | Not Available | - | 96871 - 97293 | 16159.4 |
| hypothetical protein | DXD04_00380 | Not Available | - | 97302 - 98534 | 44201.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
