Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4450 domain-containing protein | DXD04_00240 | Not Available | - | 49902 - 50525 | 23134.7 |
| beta-galactosidase | DXD04_00245 | Not Available | + | 50716 - 52788 | 79937.6 |
| hypothetical protein | DXD04_00250 | Not Available | - | 52875 - 56132 | 123652.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_00255 | Not Available | - | 56284 - 58410 | 79539.9 |
| tonb-dependent receptor | DXD04_00260 | Not Available | - | 58425 - 61562 | 115328.0 |
| duf4982 domain-containing protein | DXD04_00265 | Not Available | + | 62363 - 65362 | 113020.0 |
| glycoside hydrolase family 2 protein | DXD04_00270 | Not Available | - | 65436 - 67874 | 92350.2 |
| leucine--trna ligase | DXD04_00275 | Not Available | + | 68015 - 70849 | 107975.0 |
| yitt family protein | DXD04_00280 | Not Available | + | 70919 - 71815 | 33439.6 |
| glycoside hydrolase family 2 protein | DXD04_00285 | Not Available | + | 71933 - 74506 | 99069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
