Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3098 domain-containing protein | DXD04_00190 | Not Available | - | 38268 - 38528 | 9779.39 |
| cell division protein ftsx | DXD04_00195 | Not Available | - | 38554 - 39423 | 32563.5 |
| class i sam-dependent methyltransferase | DXD04_00200 | Not Available | - | 39430 - 40326 | 34625.6 |
| pspc domain-containing protein | DXD04_00205 | Not Available | + | 40465 - 40659 | 7431.26 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DXD04_00210 | Not Available | - | 40870 - 42243 | 51843.0 |
| hypothetical protein | DXD04_00215 | Not Available | + | 42366 - 42713 | 13239.0 |
| acetyl-coa hydrolase/transferase family protein | DXD04_00220 | Not Available | + | 42757 - 44253 | 54170.9 |
| glycosyl hydrolase | DXD04_00225 | Not Available | - | 44331 - 46481 | 80693.9 |
| rhamnogalacturonan lyase | DXD04_00230 | Not Available | - | 46512 - 48449 | 71504.5 |
| glycoside hydrolase family 28 protein | DXD04_00235 | Not Available | - | 48466 - 49905 | 53540.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
