Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | DXD04_00140 | Not Available | - | 30589 - 30810 | 8390.45 |
| ribonuclease p protein component | DXD04_00145 | Not Available | - | 30807 - 31202 | 14984.7 |
| uroporphyrinogen-iii synthase | DXD04_00150 | Not Available | - | 31277 - 32023 | 28478.3 |
| duf4271 domain-containing protein | DXD04_00155 | Not Available | - | 32029 - 32838 | 31543.9 |
| tigr00730 family rossman fold protein | DXD04_00160 | Not Available | - | 32835 - 33422 | 21728.6 |
| methionine adenosyltransferase | DXD04_00165 | Not Available | - | 33638 - 34933 | 47781.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DXD04_00170 | Not Available | - | 35164 - 35622 | 17171.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DXD04_00175 | Not Available | - | 35634 - 36689 | 40342.6 |
| trna pseudouridine(55) synthase trub | DXD04_00180 | Not Available | - | 36707 - 37411 | 26533.2 |
| undecaprenyl-diphosphate phosphatase | DXD04_00185 | Not Available | - | 37411 - 38268 | 31637.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
