Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXD04_00090 | Not Available | - | 19867 - 20985 | 43076.2 |
| udp-2,3-diacylglucosamine diphosphatase | DXD04_00095 | Not Available | - | 20982 - 21791 | 31289.4 |
| type ii toxin-antitoxin system hicb family antitoxin | DXD04_00100 | Not Available | - | 21989 - 22180 | 7387.28 |
| lysine exporter lyso family protein | DXD04_00105 | Not Available | - | 22277 - 22897 | 22197.1 |
| duf340 domain-containing protein | DXD04_00110 | Not Available | - | 22887 - 23171 | 10268.2 |
| hypothetical protein | DXD04_00115 | Not Available | + | 23826 - 24710 | 31208.6 |
| Trna-gln | Not Available | Not Available | + | 24773 - 24846 | Not Available |
| peptidase s41 | DXD04_00125 | Not Available | + | 24980 - 28222 | 121670.0 |
| tyrosine--trna ligase | DXD04_00130 | Not Available | - | 28546 - 29838 | 48414.0 |
| deoxyribonuclease | DXD04_00135 | Not Available | - | 29918 - 30574 | 24999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
