Bacteroides sp. 4_1_36 strain TM07-1

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. 4_1_36 strain TM07-1 is a Gram-negative, anaerobic bacterium belonging to the genus Bacteroides. Characterized by its inability to thrive in the presence of oxygen, this strain is adapted to anaerobic environments, which are often found in the human gut and other similar habitats. The Gram-negative nature of Bacteroides sp. 4_1_36 strain TM07-1 suggests a complex outer membrane structure, which may contribute to its survival and functionality in anaerobic ecosystems. Like other members of the Bacteroides genus, strain TM07-1 likely plays a significant role in the breakdown of complex carbohydrates and polysaccharides, facilitating the fermentation process in the gut microbiome. By doing so, it may contribute to the production of short-chain fatty acids, which are beneficial for host metabolism and health. The ability to thrive in low-oxygen conditions underscores the ecological niche that this strain occupies, highlighting its potential importance in maintaining gut homeostasis and influencing overall microbial community dynamics. Moreover, the presence of Bacteroides sp. 4_1_36 strain TM07-1 in anaerobic environments may also indicate its role in nutrient cycling and its interactions with other microbial species, ultimately shaping the metabolic landscape of the ecosystem it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. 4_1_36
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. 4_1_36 strain TM07-1

Accession NumberQSOX00000000.1

Gene Summary

Adenine Count

1275174 bp

Thymine Count

1281005 bp

Guanine Count

1109873 bp

Cytosine Count

1110806 bp

Genome Length

4777078 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cbla family class a beta-lactamaseDXD65_00005Not Available+78 - 96833452.1
5s ribosomal rnaNot AvailableNot Available+144 - 254Not Available
16s ribosomal rnaNot AvailableNot Available+319 - 1852Not Available
hypothetical proteinDXD65_00010Not Available-999 - 144817628.4
amp nucleosidaseDXD65_00015Not Available+1513 - 228929112.3
dna polymerase iii subunit deltaDXD65_00020Not Available+2331 - 335038664.0
23s ribosomal rnaNot AvailableNot Available+2336 - 5217Not Available
xre family transcriptional regulatorDXD65_00025Not Available+4260 - 472117646.9
dihydroorotate dehydrogenase electron transfer subunitDXD65_00030Not Available+4839 - 561528401.9
5s ribosomal rnaNot AvailableNot Available+5289 - 5399Not Available

Displaying genes 1 – 10 of 4057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites