Dorea formicigenerans strain TM09-19AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain TM09-19AC is a Gram-positive anaerobic bacterium that inhabits the gut of Homo sapiens. This strain is characterized by its flagella presence, which may play a role in its motility within the intestinal environment. As an anaerobe, Dorea formicigenerans strain TM09-19AC thrives in oxygen-free conditions, which are typical of the gastrointestinal tract. The ability to survive and proliferate in such an environment is crucial for its role in the gut microbiome. This strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with specific adaptations to its niche. Dorea formicigenerans is part of the diverse microbial community within the human gut, where it may contribute to various metabolic processes, including the fermentation of dietary fibers. The presence of this bacterium could have implications for gut health, influencing digestion and possibly even immune responses. Overall, the traits of Dorea formicigenerans strain TM09-19AC highlight its adaptation to the anaerobic conditions of the human gut and its potential role in maintaining gut homeostasis. Understanding such microbes can provide insights into the complexities of the gut microbiome and their contributions to human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain TM09-19AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain TM09-19AC TM09-19AC.Scaf45, whole

Gene Summary

Adenine Count

890264 bp

Thymine Count

896973 bp

Guanine Count

596507 bp

Cytosine Count

618537 bp

Genome Length

3002656 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter substrate-binding proteinDXD84_00225Not AvailableNegative52434 - 5308423475.3
abc transporter atp-binding proteinDXD84_00230Not AvailableNegative53213 - 5493765019.9
tryptophan--trna ligaseDXD84_00240Not AvailableNegative55086 - 5614740131.2
j domain-containing proteinDXD84_00245Not AvailableNegative56509 - 5762439036.6
phosphatidylserine decarboxylaseDXD84_00250Not AvailableNegative57856 - 5873133344.4
cdp-diacylglycerol--serine o-phosphatidyltransferaseDXD84_00255Not AvailableNegative58794 - 5941423031.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive59610 - 59973Not Available
upf0104 family proteinDXD84_00260Not AvailableNegative59433 - 6046438434.0
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseDXD84_00270Not AvailableNegative61706 - 6280942148.0
hypothetical proteinDXD84_00275Not AvailableNegative62907 - 6325413980.2

Displaying genes 71 – 80 of 2778 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.