Dorea formicigenerans strain TM09-19AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain TM09-19AC is a Gram-positive anaerobic bacterium that inhabits the gut of Homo sapiens. This strain is characterized by its flagella presence, which may play a role in its motility within the intestinal environment. As an anaerobe, Dorea formicigenerans strain TM09-19AC thrives in oxygen-free conditions, which are typical of the gastrointestinal tract. The ability to survive and proliferate in such an environment is crucial for its role in the gut microbiome. This strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with specific adaptations to its niche. Dorea formicigenerans is part of the diverse microbial community within the human gut, where it may contribute to various metabolic processes, including the fermentation of dietary fibers. The presence of this bacterium could have implications for gut health, influencing digestion and possibly even immune responses. Overall, the traits of Dorea formicigenerans strain TM09-19AC highlight its adaptation to the anaerobic conditions of the human gut and its potential role in maintaining gut homeostasis. Understanding such microbes can provide insights into the complexities of the gut microbiome and their contributions to human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain TM09-19AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain TM09-19AC TM09-19AC.Scaf45, whole

Gene Summary

Adenine Count

890264 bp

Thymine Count

896973 bp

Guanine Count

596507 bp

Cytosine Count

618537 bp

Genome Length

3002656 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine synthaseDXD84_00885Not AvailableNegative200406 - 20189354716.3
3-isopropylmalate dehydratase small subunitDXD84_00890Not AvailableNegative201941 - 20243517906.4
3-isopropylmalate dehydratase large subunitDXD84_00895Not AvailableNegative202435 - 20371245605.2
isopeptide-forming domain-containing fimbrial proteinDXD84_00900Not AvailableNegative203737 - 20532357772.6
rrf2 family transcriptional regulatorDXD84_00910Not AvailableNegative206032 - 20647816789.0
cysteine synthase aDXD84_00915Not AvailableNegative206566 - 20749832875.6
3-isopropylmalate dehydrogenaseDXD84_00920Not AvailablePositive207869 - 20870833044.7
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtDXD84_00925Not AvailableNegative208818 - 20937220324.7
pyridoxal 5'-phosphate synthase lyase subunit pdxsDXD84_00930Not AvailableNegative209374 - 21024931463.3
hypothetical proteinDXD84_00935Not AvailableNegative210615 - 21164339309.3

Displaying genes 201 – 210 of 2778 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.