Dorea formicigenerans strain TM09-19AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain TM09-19AC is a Gram-positive anaerobic bacterium that inhabits the gut of Homo sapiens. This strain is characterized by its flagella presence, which may play a role in its motility within the intestinal environment. As an anaerobe, Dorea formicigenerans strain TM09-19AC thrives in oxygen-free conditions, which are typical of the gastrointestinal tract. The ability to survive and proliferate in such an environment is crucial for its role in the gut microbiome. This strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with specific adaptations to its niche. Dorea formicigenerans is part of the diverse microbial community within the human gut, where it may contribute to various metabolic processes, including the fermentation of dietary fibers. The presence of this bacterium could have implications for gut health, influencing digestion and possibly even immune responses. Overall, the traits of Dorea formicigenerans strain TM09-19AC highlight its adaptation to the anaerobic conditions of the human gut and its potential role in maintaining gut homeostasis. Understanding such microbes can provide insights into the complexities of the gut microbiome and their contributions to human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain TM09-19AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain TM09-19AC TM09-19AC.Scaf45, whole

Gene Summary

Adenine Count

890264 bp

Thymine Count

896973 bp

Guanine Count

596507 bp

Cytosine Count

618537 bp

Genome Length

3002656 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDXD84_08390Not AvailableNegative1781949 - 178230213397.0
hypothetical proteinDXD84_08395Not AvailablePositive1782503 - 178296417297.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDXD84_08400Not AvailablePositive1783048 - 178410337584.1
polc-type dna polymerase iiiDXD84_08405Not AvailablePositive1784096 - 1788661171322.0
anaerobic ribonucleoside-triphosphate reductaseDXD84_08410Not AvailablePositive1788901 - 179109083257.9
anaerobic ribonucleoside-triphosphate reductase activating proteinDXD84_08415Not AvailablePositive1791209 - 179170318932.7
yitt family proteinDXD84_08420Not AvailablePositive1791803 - 179266631422.5
xre family transcriptional regulatorDXD84_08425Not AvailablePositive1792798 - 179313612817.5
alanine:cation symporter family proteinDXD84_08430Not AvailableNegative1793342 - 179470647987.5
adenylosuccinate lyaseDXD84_08435Not AvailableNegative1794928 - 179636153815.9

Displaying genes 1641 – 1650 of 2778 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.