Agathobacter rectalis strain AM26-2LB

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM26-2LB is a Gram-positive, rod-shaped bacterium classified as a chemoheterotroph and an anaerobe. This strain is non-motile, lacking flagella, and is adapted to a mesophilic temperature range, with an optimal growth temperature of 37°C. It possesses a single replicon and a single membrane, characteristics that are typical for many bacteria in its classification. This strain is free-living, indicating that it does not rely on a specific host for its survival and can thrive in multiple habitats. Notably, it has been identified in association with Homo sapiens, suggesting a potential role in the human microbiome. The absence of sporulation in this strain indicates that it does not produce spores, which may affect its survival strategies under unfavorable conditions. The ecological insight gained from understanding Agathobacter rectalis strain AM26-2LB lies in its potential contributions to human health. As a member of the gut microbiota, it may play a role in metabolic processes or maintaining gut homeostasis, reflecting the complex interactions within the microbiome and its influence on overall human health. The study of such strains underlines the importance of anaerobic bacteria in various ecological niches and their significance in human-associated environments. The accession number QSKY00000000.1 provides a reference for further genomic analysis and exploration of its functional capabilities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM26-2LB

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM26-2LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM26-2LB AM26-2LB.Scaf93, whole

Gene Summary

Adenine Count

1028093 bp

Thymine Count

1070600 bp

Guanine Count

717457 bp

Cytosine Count

769488 bp

Genome Length

3585898 bp

Protein-coding Genes

3294 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-serNot AvailableNot AvailablePositive559591 - 559678Not Available
fe-s-containing hydro-lyaseDW703_02720Not AvailableNegative559771 - 56032220296.6
fumarate hydrataseDW703_02725Not AvailableNegative560485 - 56133030047.4
dna gyrase subunit aDW703_02730Not AvailableNegative561588 - 56414695456.8
dna topoisomerase (atp-hydrolyzing) subunit bDW703_02735Not AvailableNegative564165 - 56610272110.3
dna replication/repair protein recfDW703_02740Not AvailableNegative566095 - 56718341732.2
rna-binding s4 domain-containing proteinDW703_02745Not AvailableNegative567183 - 5673987845.43
dna polymerase iii subunit betaDW703_02750Not AvailableNegative567407 - 56851941905.8
chromosomal replication initiator protein dnaaDW703_02755Not AvailableNegative568805 - 57016651685.6
50s ribosomal protein l34DW703_02760Not AvailablePositive570604 - 5707385138.64

Displaying genes 561 – 570 of 3373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.