Agathobacter rectalis strain AM29-10

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM29-10 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph. This organism is anaerobic, meaning it does not require oxygen for its growth and metabolism. Agathobacter rectalis is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical human body temperature, suggesting a niche within the human microbiome. This strain is characterized by having one replicon and a single membrane, which is typical of certain bacteria. Agathobacter rectalis is recognized as free-living, indicating its ability to exist independently rather than relying on a host organism for survival. However, it is also associated with Homo sapiens, reflecting its presence in the human gut microbiota. Notably, Agathobacter rectalis strain AM29-10 does not undergo sporulation, a trait that may affect its survival and reproduction strategies in various environments. The strain has been cataloged under the accession number QSKC00000000.1, providing a reference for further research and characterization. From an ecological perspective, Agathobacter rectalis contributes to the microbial diversity of the human gut, playing a role in the complex interactions that influence host health. Its ability to thrive in anaerobic conditions and utilize organic compounds as energy sources may be significant for maintaining gut homeostasis and potentially influencing metabolic processes within the host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM29-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM29-10
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM29-10 AM29-10.Scaf86, whole genome

Gene Summary

Adenine Count

948332 bp

Thymine Count

971173 bp

Guanine Count

647751 bp

Cytosine Count

675241 bp

Genome Length

3243530 bp

Protein-coding Genes

2910 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnfabcdge type electron transport complex subunit bDW753_03260Not AvailablePositive736585 - 73737627024.1
fad:protein fmn transferaseDW753_03265Not AvailableNegative737435 - 73848438339.1
glutamate 5-kinaseDW753_03270Not AvailablePositive738637 - 73955133423.2
duf896 domain-containing proteinDW753_03275Not AvailablePositive739583 - 7398078670.21
5-formyltetrahydrofolate cyclo-ligaseDW753_03280Not AvailablePositive739782 - 74035722192.5
glutamate-5-semialdehyde dehydrogenaseDW753_03285Not AvailablePositive740350 - 74160645870.7
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDW753_03290Not AvailablePositive741654 - 74309355384.6
nusg domain ii-containing proteinDW753_03295Not AvailablePositive743086 - 74348414348.4
gx transporter family proteinDW753_03300Not AvailablePositive743518 - 74401517679.7
holliday junction branch migration protein ruvaDW753_03305Not AvailablePositive744108 - 74472522165.8

Displaying genes 631 – 640 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.