Agathobacter rectalis strain AM29-10

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM29-10 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph. This organism is anaerobic, meaning it does not require oxygen for its growth and metabolism. Agathobacter rectalis is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical human body temperature, suggesting a niche within the human microbiome. This strain is characterized by having one replicon and a single membrane, which is typical of certain bacteria. Agathobacter rectalis is recognized as free-living, indicating its ability to exist independently rather than relying on a host organism for survival. However, it is also associated with Homo sapiens, reflecting its presence in the human gut microbiota. Notably, Agathobacter rectalis strain AM29-10 does not undergo sporulation, a trait that may affect its survival and reproduction strategies in various environments. The strain has been cataloged under the accession number QSKC00000000.1, providing a reference for further research and characterization. From an ecological perspective, Agathobacter rectalis contributes to the microbial diversity of the human gut, playing a role in the complex interactions that influence host health. Its ability to thrive in anaerobic conditions and utilize organic compounds as energy sources may be significant for maintaining gut homeostasis and potentially influencing metabolic processes within the host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM29-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM29-10
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM29-10 AM29-10.Scaf86, whole genome

Gene Summary

Adenine Count

948332 bp

Thymine Count

971173 bp

Guanine Count

647751 bp

Cytosine Count

675241 bp

Genome Length

3243530 bp

Protein-coding Genes

2910 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide deformylaseDW753_02850Not AvailablePositive636194 - 63667017411.9
methionyl-trna formyltransferaseDW753_02855Not AvailablePositive636725 - 63765734135.1
peptidaseDW753_02860Not AvailablePositive637727 - 63843125498.3
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDW753_02865Not AvailablePositive638694 - 64000449137.9
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDW753_02870Not AvailablePositive640200 - 64126440011.4
stp1/irep family pp2c-type ser/thr phosphataseDW753_02875Not AvailablePositive641265 - 64199326447.4
ribosome small subunit-dependent gtpase aDW753_02885Not AvailablePositive644540 - 64544834291.2
ribulose-phosphate 3-epimeraseDW753_02890Not AvailablePositive645396 - 64612726520.4
thiamine diphosphokinaseDW753_02895Not AvailablePositive646204 - 64684823756.2
ggdef domain-containing proteinDW753_02900Not AvailablePositive646955 - 650275129096.0

Displaying genes 551 – 560 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.