Agathobacter rectalis strain AM29-10

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM29-10 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph. This organism is anaerobic, meaning it does not require oxygen for its growth and metabolism. Agathobacter rectalis is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical human body temperature, suggesting a niche within the human microbiome. This strain is characterized by having one replicon and a single membrane, which is typical of certain bacteria. Agathobacter rectalis is recognized as free-living, indicating its ability to exist independently rather than relying on a host organism for survival. However, it is also associated with Homo sapiens, reflecting its presence in the human gut microbiota. Notably, Agathobacter rectalis strain AM29-10 does not undergo sporulation, a trait that may affect its survival and reproduction strategies in various environments. The strain has been cataloged under the accession number QSKC00000000.1, providing a reference for further research and characterization. From an ecological perspective, Agathobacter rectalis contributes to the microbial diversity of the human gut, playing a role in the complex interactions that influence host health. Its ability to thrive in anaerobic conditions and utilize organic compounds as energy sources may be significant for maintaining gut homeostasis and potentially influencing metabolic processes within the host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM29-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM29-10
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM29-10 AM29-10.Scaf86, whole genome

Gene Summary

Adenine Count

948332 bp

Thymine Count

971173 bp

Guanine Count

647751 bp

Cytosine Count

675241 bp

Genome Length

3243530 bp

Protein-coding Genes

2910 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
scp-2 sterol transfer family proteinDW753_12570Not AvailablePositive2688769 - 268975838063.7
hit family proteinDW753_12575Not AvailablePositive2689867 - 269028315791.7
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDW753_12580Not AvailableNegative2690401 - 269147738850.5
hypothetical proteinDW753_12585Not AvailablePositive2691732 - 269199810009.3
spore cortex-lytic enzymeDW753_12590Not AvailablePositive2692118 - 269335043292.2
ornithine carbamoyltransferaseDW753_12595Not AvailablePositive2693586 - 269457537269.6
biotin--[acetyl-coa-carboxylase] ligaseDW753_12600Not AvailablePositive2694628 - 269560836231.6
hypothetical proteinDW753_12605Not AvailablePositive2695601 - 269593613131.5
type iii pantothenate kinaseDW753_12610Not AvailablePositive2695940 - 269672228340.4
trna dihydrouridine synthase dusbDW753_12615Not AvailablePositive2696727 - 269771336786.7

Displaying genes 2411 – 2420 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.