Agathobacter rectalis strain AM29-10

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AM29-10 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph. This organism is anaerobic, meaning it does not require oxygen for its growth and metabolism. Agathobacter rectalis is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical human body temperature, suggesting a niche within the human microbiome. This strain is characterized by having one replicon and a single membrane, which is typical of certain bacteria. Agathobacter rectalis is recognized as free-living, indicating its ability to exist independently rather than relying on a host organism for survival. However, it is also associated with Homo sapiens, reflecting its presence in the human gut microbiota. Notably, Agathobacter rectalis strain AM29-10 does not undergo sporulation, a trait that may affect its survival and reproduction strategies in various environments. The strain has been cataloged under the accession number QSKC00000000.1, providing a reference for further research and characterization. From an ecological perspective, Agathobacter rectalis contributes to the microbial diversity of the human gut, playing a role in the complex interactions that influence host health. Its ability to thrive in anaerobic conditions and utilize organic compounds as energy sources may be significant for maintaining gut homeostasis and potentially influencing metabolic processes within the host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AM29-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AM29-10
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AM29-10 AM29-10.Scaf86, whole genome

Gene Summary

Adenine Count

948332 bp

Thymine Count

971173 bp

Guanine Count

647751 bp

Cytosine Count

675241 bp

Genome Length

3243530 bp

Protein-coding Genes

2910 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-6a reductaseDW753_08220Not AvailableNegative1754722 - 175677675570.8
precorrin-3b c(17)-methyltransferaseDW753_08225Not AvailableNegative1756769 - 175750026742.4
cobalamin biosynthesis protein cbigDW753_08230Not AvailableNegative1757502 - 175866242675.4
precorrin-4 c(11)-methyltransferaseDW753_08235Not AvailableNegative1758685 - 175946128041.5
cobalamin biosynthesis protein cbidDW753_08240Not AvailableNegative1759419 - 176056741916.7
precorrin-8x methylmutaseDW753_08245Not AvailableNegative1760591 - 176120522295.2
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDW753_08250Not AvailableNegative1761219 - 176228039382.6
cobalamin biosynthesis protein cobdDW753_08255Not AvailableNegative1762308 - 176330036509.1
histidine phosphatase family proteinDW753_08260Not AvailableNegative1763323 - 176399725851.9
adenosylcobinamide kinaseDW753_08265Not AvailableNegative1763970 - 176441617254.8

Displaying genes 1581 – 1590 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.