Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | strain AM29-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
948332 bp
Thymine Count
971173 bp
Guanine Count
647751 bp
Cytosine Count
675241 bp
Genome Length
3243530 bp
Protein-coding Genes
2910 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DW753_05585 | Not Available | Negative | 1221861 - 1223861 | 73099.1 |
| lysr family transcriptional regulator | DW753_05590 | Not Available | Positive | 1224116 - 1224997 | 33519.4 |
| lysr family transcriptional regulator | DW753_05595 | Not Available | Negative | 1224994 - 1225875 | 32889.4 |
| shikimate dehydrogenase | DW753_05600 | Not Available | Positive | 1226137 - 1227015 | 31995.7 |
| mfs transporter | DW753_05605 | Not Available | Positive | 1227156 - 1228367 | 42762.9 |
| type i 3-dehydroquinate dehydratase | DW753_05610 | Not Available | Positive | 1228435 - 1229196 | 27686.6 |
| trap transporter small permease | DW753_05615 | Not Available | Positive | 1229381 - 1229998 | 24067.7 |
| trap transporter large permease | DW753_05620 | Not Available | Positive | 1229999 - 1231288 | 45809.5 |
| c4-dicarboxylate abc transporter | DW753_05625 | Not Available | Positive | 1231513 - 1232514 | 37164.7 |
| shikimate kinase | DW753_05630 | Not Available | Positive | 1232703 - 1233506 | 30452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

