Parabacteroides merdae strain AM34-17

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae strain AM34-17 is a Gram-negative, anaerobic bacterium classified within the gastrointestinal tract of Homo sapiens. This species is characterized by its rod-shaped morphology and the presence of flagella, which may contribute to its motility within the gut environment. With a single replicon, Parabacteroides merdae strain AM34-17 showcases a stable genetic structure, potentially influencing its adaptability and role in the gut microbiome. The strain has been associated with health effects, specifically OSA (obstructive sleep apnea), indicating a potential link between gut microbiota composition and sleep-related health conditions. The habitat of this strain within the gastrointestinal tract emphasizes its role in the gut microbiomes, which are essential for various metabolic processes and overall health. The presence of such bacteria is crucial as they may contribute to the maintenance of gut homeostasis and influence host immunity and metabolism. Understanding the characteristics and functions of Parabacteroides merdae strain AM34-17 can provide insights into the complex interactions within the gut microbiome and their implications for human health, particularly in relation to conditions like OSA. Further research is necessary to explore these relationships and the potential therapeutic applications of modulating gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
Strainstrain AM34-17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae strain AM34-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut microbiomes
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae strain AM34-17 AM34-17.Scaf82, whole genome

Gene Summary

Adenine Count

1271882 bp

Thymine Count

1316970 bp

Guanine Count

1085623 bp

Cytosine Count

1035085 bp

Genome Length

4710988 bp

Protein-coding Genes

3772 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,4-beta-xylanaseDW828_06035Not AvailablePositive1456409 - 145735035864.5
arac family transcriptional regulatorDW828_06040Not AvailableNegative1457392 - 145828834677.5
aldo/keto reductaseDW828_06045Not AvailablePositive1458470 - 145965143681.5
alpha/beta fold hydrolaseDW828_06050Not AvailablePositive1459666 - 146069138349.5
abc transporter atp-binding proteinDW828_06055Not AvailablePositive1460843 - 146248062178.6
duf3943 domain-containing proteinDW828_06060Not AvailableNegative1462477 - 146395555984.3
trimeric intracellular cation channel family proteinDW828_06065Not AvailablePositive1464112 - 146472322101.7
type i asparaginaseDW828_06070Not AvailablePositive1464742 - 146581239188.4
mbl fold metallo-hydrolaseDW828_06075Not AvailablePositive1465843 - 146664630125.0
Trna-lysNot AvailableNot AvailablePositive1466738 - 1466813Not Available

Displaying genes 1181 – 1190 of 3863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
OsaCausesPMC12415091

Displaying health effects 1 – 1 of 1 in total