Mediterraneibacter gnavus strain AM38-12

Gram-positiveCocciNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

Mediterraneibacter gnavus strain AM38-12 is a Gram-positive, non-motile coccus that thrives in the anaerobic environment of the animal intestinal microflora, specifically within Homo sapiens. As a chemoheterotroph, it utilizes organic compounds for energy, playing a role in the complex ecosystem of the human gut. This strain is mesophilic, with an optimal growth temperature of 37°C, which aligns with the average human body temperature, facilitating its adaptation to the intestinal environment. It possesses one replicon, indicating a streamlined genomic organization. M. gnavus is associated with health impacts, particularly inflammatory bowel disease (IBD), suggesting a potential pathogenic role in humans. Its presence in the gut microbiome may influence inflammatory processes, which are crucial in IBD pathogenesis. The strain's ability to thrive in the anaerobic conditions of the intestine might also contribute to its involvement in gut health and disease dynamics. Despite its nonsporulating nature, the presence of flagella is noted, which may be relevant for interactions within the gut environment, although its non-motility indicates that flagella may not be used for movement. In summary, Mediterraneibacter gnavus strain AM38-12 exemplifies the complex interplay between gut microbiota and human health, particularly in relation to inflammatory conditions. Understanding its ecological role could provide insights into managing gut health and addressing IBD.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter gnavus
Strainstrain AM38-12

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Mediterraneibacter gnavus strain AM38-12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Mediterraneibacter gnavus strain AM38-12 AM38-12.Scaf52, whole

Gene Summary

Adenine Count

838531 bp

Thymine Count

916492 bp

Guanine Count

602945 bp

Cytosine Count

722181 bp

Genome Length

3080758 bp

Protein-coding Genes

2755 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnakDW865_00015Not AvailableNegative2797 - 466265831.8
nucleotide exchange factor grpeDW865_00020Not AvailableNegative4679 - 532924883.9
heat-inducible transcription repressor hrcaDW865_00025Not AvailableNegative5356 - 640538893.9
hypothetical proteinDW865_00030Not AvailableNegative6586 - 714021070.6
sensor histidine kinaseDW865_00035Not AvailableNegative7137 - 822241119.8
dna-binding response regulatorDW865_00040Not AvailableNegative8219 - 889025413.0
hypothetical proteinDW865_00045Not AvailableNegative9054 - 92788381.43
oxygen-independent coproporphyrinogen iii oxidaseDW865_00050Not AvailableNegative9341 - 1049844621.0
glycoside hydrolase family 28 proteinDW865_00055Not AvailableNegative10544 - 1210358142.8
glycosyl hydrolase family 88DW865_00060Not AvailablePositive12377 - 1351344264.7

Displaying genes 101 – 110 of 2874 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Inflammatory bowel disease (ibd)CausesPMC12034673

Displaying health effects 1 – 1 of 1 in total