Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DW869_04945 | Not Available | Negative | 1224294 - 1224815 | 19772.5 |
| hypothetical protein | DW869_04950 | Not Available | Negative | 1224837 - 1225358 | 21224.9 |
| hypothetical protein | DW869_04955 | Not Available | Positive | 1225550 - 1225729 | 6933.42 |
| port family protein | DW869_04960 | Not Available | Negative | 1225726 - 1226364 | 22822.1 |
| ion transporter | DW869_04965 | Not Available | Negative | 1226590 - 1227351 | 29102.3 |
| port family protein | DW869_04970 | Not Available | Negative | 1227517 - 1228194 | 25186.4 |
| mechanosensitive ion channel family protein | DW869_04975 | Not Available | Negative | 1228228 - 1229073 | 30929.2 |
| alpha-1,2-fucosyltransferase | DW869_04985 | Not Available | Positive | 1229985 - 1230830 | 33694.5 |
| sam-dependent methyltransferase | DW869_04990 | Not Available | Negative | 1231031 - 1231735 | 26022.9 |
| gliding motility lipoprotein gldb | DW869_04995 | Not Available | Negative | 1231759 - 1232760 | 38875.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

