Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DW869_04835 | Not Available | Negative | 1198797 - 1200071 | 47059.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW869_04840 | Not Available | Negative | 1200090 - 1200686 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW869_04845 | Not Available | Negative | 1200711 - 1201349 | 23121.2 |
| na(+)-translocating nadh-quinone reductase subunit c | DW869_04850 | Not Available | Negative | 1201368 - 1202042 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DW869_04855 | Not Available | Negative | 1202056 - 1203264 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit a | DW869_04860 | Not Available | Negative | 1203293 - 1204642 | 49524.8 |
| hypothetical protein | DW869_04870 | Not Available | Positive | 1206218 - 1206421 | 7631.28 |
| hypothetical protein | DW869_04880 | Not Available | Negative | 1207684 - 1208586 | 34771.4 |
| aminopeptidase | DW869_04885 | Not Available | Negative | 1208936 - 1210312 | 51853.3 |
| sodium:proton antiporter | DW869_04890 | Not Available | Negative | 1210424 - 1211875 | 51409.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

