Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_04680 | Not Available | Negative | 1164524 - 1164646 | 4390.24 |
| o-acetyl-adp-ribose deacetylase | DW869_04685 | Not Available | Negative | 1164874 - 1165500 | 22638.3 |
| potassium-transporting atpase subunit f | DW869_04690 | Not Available | Positive | 1165768 - 1165848 | 3136.13 |
| k+-transporting atpase subunit a | DW869_04695 | Not Available | Positive | 1165875 - 1167581 | 61976.5 |
| k(+)-transporting atpase subunit b | DW869_04700 | Not Available | Positive | 1167615 - 1169648 | 72494.1 |
| k(+)-transporting atpase subunit c | DW869_04705 | Not Available | Positive | 1169662 - 1170231 | 20540.6 |
| hypothetical protein | DW869_04710 | Not Available | Positive | 1170505 - 1171206 | 25515.1 |
| hypothetical protein | DW869_04715 | Not Available | Positive | 1171233 - 1171478 | 9461.5 |
| had family hydrolase | DW869_04720 | Not Available | Negative | 1171475 - 1172164 | 26444.0 |
| chloramphenicol acetyltransferase | DW869_04725 | Not Available | Negative | 1172201 - 1172836 | 24088.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

