Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cina family protein | DW869_04630 | Not Available | Negative | 1155402 - 1155902 | 17534.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DW869_04635 | Not Available | Negative | 1155924 - 1156943 | 36941.3 |
| type i methionyl aminopeptidase | DW869_04640 | Not Available | Negative | 1156967 - 1157821 | 31838.1 |
| hypothetical protein | DW869_04645 | Not Available | Positive | 1158058 - 1158276 | 8234.71 |
| sugar o-acetyltransferase | DW869_04650 | Not Available | Negative | 1158336 - 1158887 | 20098.3 |
| dmt family transporter | DW869_04655 | Not Available | Negative | 1158900 - 1159808 | 34069.1 |
| glycine/betaine abc transporter substrate-binding protein | DW869_04660 | Not Available | Negative | 1159953 - 1160795 | 31666.2 |
| proline/glycine betaine abc transporter permease | DW869_04665 | Not Available | Negative | 1160798 - 1161622 | 29538.8 |
| glycine betaine/l-proline abc transporter atp-binding protein | DW869_04670 | Not Available | Negative | 1161619 - 1162845 | 45636.3 |
| sigma-54-dependent fis family transcriptional regulator | DW869_04675 | Not Available | Positive | 1163147 - 1164484 | 50007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

