Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_04580 | Not Available | Negative | 1146924 - 1148021 | 41586.1 |
| duf58 domain-containing protein | DW869_04585 | Not Available | Negative | 1148027 - 1148896 | 33730.5 |
| atpase | DW869_04590 | Not Available | Negative | 1149146 - 1150141 | 37374.8 |
| hu family dna-binding protein | DW869_04595 | Not Available | Negative | 1150426 - 1151856 | 52640.7 |
| hu family dna-binding protein | DW869_04600 | Not Available | Negative | 1151882 - 1152154 | 10202.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DW869_04605 | Not Available | Negative | 1152228 - 1153526 | 50104.2 |
| signal recognition particle-docking protein ftsy | DW869_04610 | Not Available | Negative | 1153530 - 1154489 | 34743.9 |
| duf4295 domain-containing protein | DW869_04615 | Not Available | Negative | 1154663 - 1154818 | 5827.19 |
| 50s ribosomal protein l33 | DW869_04620 | Not Available | Negative | 1154828 - 1155016 | 7205.97 |
| 50s ribosomal protein l28 | DW869_04625 | Not Available | Negative | 1155037 - 1155297 | 9789.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

