Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DW869_04530 | Not Available | Positive | 1135030 - 1137597 | 96451.1 |
| hypothetical protein | DW869_04535 | Not Available | Positive | 1137628 - 1138845 | 45948.8 |
| universal stress protein | DW869_04540 | Not Available | Negative | 1139121 - 1140248 | 43112.8 |
| dna-binding protein | DW869_04545 | Not Available | Negative | 1140324 - 1140593 | 9982.98 |
| phosphatase pap2 family protein | DW869_04550 | Not Available | Negative | 1140723 - 1141430 | 26808.5 |
| tetratricopeptide repeat protein | DW869_04555 | Not Available | Negative | 1141441 - 1142259 | 30730.3 |
| protein batd | DW869_04560 | Not Available | Negative | 1142279 - 1144114 | 67725.8 |
| tetratricopeptide repeat protein | DW869_04565 | Not Available | Negative | 1144154 - 1144861 | 27631.4 |
| vwa domain-containing protein | DW869_04570 | Not Available | Negative | 1144871 - 1145893 | 37851.1 |
| vwa domain-containing protein | DW869_04575 | Not Available | Negative | 1145906 - 1146904 | 37254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

