Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DW869_04375 | Not Available | Negative | 1101416 - 1102033 | 23930.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DW869_04380 | Not Available | Negative | 1102478 - 1102852 | 14212.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DW869_04385 | Not Available | Positive | 1102931 - 1103689 | 28105.6 |
| insulinase family protein | DW869_04390 | Not Available | Positive | 1103690 - 1104976 | 48727.6 |
| phosphatidylinositol-4-phosphate 5-kinase | DW869_04395 | Not Available | Positive | 1105048 - 1106166 | 42526.8 |
| inositol monophosphatase | DW869_04400 | Not Available | Positive | 1106174 - 1106962 | 29098.5 |
| duf2461 domain-containing protein | DW869_04405 | Not Available | Positive | 1107038 - 1107703 | 25851.7 |
| yhch/yjgk/yial family protein | DW869_04410 | Not Available | Positive | 1107740 - 1108180 | 16248.5 |
| 1,4-alpha-glucan-branching enzyme | DW869_04415 | Not Available | Positive | 1108209 - 1110236 | 78102.2 |
| hypothetical protein | DW869_04420 | Not Available | Positive | 1110240 - 1111391 | 44032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

