Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | DW869_04325 | Not Available | Negative | 1089160 - 1090101 | 36259.7 |
| penicillin-binding protein | DW869_04330 | Not Available | Positive | 1090262 - 1092589 | 88345.2 |
| hypothetical protein | DW869_04335 | Not Available | Positive | 1092796 - 1093623 | 31907.4 |
| arac family transcriptional regulator | DW869_04340 | Not Available | Negative | 1093698 - 1094621 | 36234.9 |
| fructose-6-phosphate aldolase | DW869_04345 | Not Available | Negative | 1094773 - 1095429 | 23517.4 |
| abc transporter permease | DW869_04350 | Not Available | Negative | 1095526 - 1096632 | 41634.3 |
| abc transporter permease | DW869_04355 | Not Available | Negative | 1096645 - 1097751 | 41435.5 |
| abc transporter atp-binding protein | DW869_04360 | Not Available | Negative | 1097775 - 1099229 | 54506.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW869_04365 | Not Available | Negative | 1099238 - 1100134 | 33034.6 |
| tolc family protein | DW869_04370 | Not Available | Negative | 1100121 - 1101419 | 49733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

