Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell surface protein | DW869_04175 | Not Available | Negative | 1054060 - 1056891 | 98116.0 |
| hypothetical protein | DW869_04180 | Not Available | Positive | 1057895 - 1058098 | 7833.56 |
| atp-binding protein | DW869_04185 | Not Available | Negative | 1058638 - 1059996 | 52846.8 |
| hypothetical protein | DW869_04190 | Not Available | Positive | 1060249 - 1060506 | 10165.3 |
| hypothetical protein | DW869_04195 | Not Available | Negative | 1060648 - 1062315 | 64807.9 |
| alpha/beta hydrolase | DW869_04200 | Not Available | Positive | 1062581 - 1063450 | 32862.5 |
| hypothetical protein | DW869_04205 | Not Available | Positive | 1063815 - 1064102 | 10636.0 |
| sugar o-acetyltransferase | DW869_04210 | Not Available | Positive | 1064117 - 1064692 | 20877.8 |
| hypothetical protein | DW869_04215 | Not Available | Negative | 1064714 - 1064893 | 6327.56 |
| hypothetical protein | DW869_04220 | Not Available | Negative | 1064890 - 1065144 | 9494.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

