Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_04025 | Not Available | Negative | 1012523 - 1012642 | 4138.87 |
| hypothetical protein | DW869_04030 | Not Available | Positive | 1012962 - 1013633 | 25581.6 |
| sigma-70 family rna polymerase sigma factor | DW869_04035 | Not Available | Positive | 1013786 - 1014259 | 19014.9 |
| hypothetical protein | DW869_04040 | Not Available | Positive | 1014272 - 1014850 | 22985.1 |
| hypothetical protein | DW869_04045 | Not Available | Positive | 1014927 - 1015856 | 35547.2 |
| atp-binding cassette domain-containing protein | DW869_04050 | Not Available | Positive | 1015853 - 1016506 | 24548.9 |
| n-acetylglucosamine-6-phosphate deacetylase | DW869_04055 | Not Available | Negative | 1016730 - 1017893 | 42267.2 |
| duf4982 domain-containing protein | DW869_04060 | Not Available | Negative | 1018069 - 1020573 | 94151.0 |
| glycoside hydrolase family 92 protein | DW869_04065 | Not Available | Negative | 1020576 - 1022828 | 85450.5 |
| beta-n-acetylhexosaminidase | DW869_04070 | Not Available | Negative | 1022855 - 1024909 | 77115.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

