Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | DW869_03975 | Not Available | Positive | 998694 - 999890 | 46212.1 |
| mfs transporter | DW869_03980 | Not Available | Positive | 999909 - 1001144 | 44685.5 |
| glucosamine-6-phosphate deaminase | DW869_03985 | Not Available | Positive | 1001190 - 1001981 | 29021.6 |
| glucosamine-6-phosphate deaminase | DW869_03990 | Not Available | Positive | 1001985 - 1003973 | 74771.3 |
| tigr02757 family protein | DW869_03995 | Not Available | Negative | 1004149 - 1004913 | 29921.8 |
| arac family transcriptional regulator | DW869_04000 | Not Available | Negative | 1004979 - 1005857 | 34389.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_04005 | Not Available | Positive | 1006034 - 1007101 | 39261.3 |
| acrb/acrd/acrf family protein | DW869_04010 | Not Available | Positive | 1007101 - 1010226 | 115872.0 |
| tolc family protein | DW869_04015 | Not Available | Positive | 1010259 - 1011638 | 51484.0 |
| dna-binding protein | DW869_04020 | Not Available | Negative | 1011853 - 1012557 | 26979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

