Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DW869_03775 | Not Available | Negative | 948803 - 951850 | 112605.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_03780 | Not Available | Negative | 951869 - 952924 | 38693.3 |
| arac family transcriptional regulator | DW869_03785 | Not Available | Positive | 953088 - 953933 | 32510.7 |
| hypothetical protein | DW869_03790 | Not Available | Negative | 953940 - 956105 | 78912.0 |
| hypothetical protein | DW869_03795 | Not Available | Positive | 956185 - 957570 | 50940.9 |
| hypothetical protein | DW869_03800 | Not Available | Positive | 957597 - 958502 | 35070.8 |
| s9 family peptidase | DW869_03805 | Not Available | Negative | 958559 - 961009 | 91301.2 |
| duf4891 domain-containing protein | DW869_03810 | Not Available | Negative | 961098 - 961496 | 14987.3 |
| duf308 domain-containing protein | DW869_03815 | Not Available | Negative | 961507 - 962073 | 20327.0 |
| ytxh domain-containing protein | DW869_03820 | Not Available | Positive | 962555 - 962815 | 9298.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

