Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase xylanase | DW869_03720 | Not Available | Negative | 935823 - 936782 | 35516.7 |
| spor domain-containing protein | DW869_03725 | Not Available | Negative | 936908 - 937405 | 17961.2 |
| ytxh domain-containing protein | DW869_03730 | Not Available | Positive | 937616 - 937813 | 6773.24 |
| phage holin family protein | DW869_03735 | Not Available | Positive | 937891 - 938247 | 13343.2 |
| hypothetical protein | DW869_03740 | Not Available | Positive | 938250 - 938516 | 10057.5 |
| peptidase s41 | DW869_03745 | Not Available | Positive | 938546 - 941806 | 123008.0 |
| d-xylose transporter xyle | DW869_03755 | Not Available | Negative | 942992 - 944431 | 52826.7 |
| duf1705 domain-containing protein | DW869_03760 | Not Available | Negative | 944482 - 946188 | 64929.2 |
| hypothetical protein | DW869_03765 | Not Available | Negative | 946175 - 947362 | 45403.3 |
| tolc family protein | DW869_03770 | Not Available | Negative | 947511 - 948803 | 48388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

