Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | DW869_03570 | Not Available | Negative | 904923 - 905963 | 40002.5 |
| acylneuraminate cytidylyltransferase family protein | DW869_03575 | Not Available | Negative | 905969 - 906664 | 25975.1 |
| n-acetylneuraminate synthase | DW869_03580 | Not Available | Negative | 906680 - 907684 | 36911.4 |
| atp-grasp domain-containing protein | DW869_03585 | Not Available | Negative | 907677 - 908669 | 37635.0 |
| diaminopimelate decarboxylase | DW869_03590 | Not Available | Negative | 908687 - 909862 | 44602.5 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DW869_03595 | Not Available | Negative | 909849 - 910982 | 42124.0 |
| legc family aminotransferase | DW869_03600 | Not Available | Negative | 910979 - 912133 | 43337.6 |
| nucleoside-diphosphate sugar epimerase | DW869_03605 | Not Available | Negative | 912152 - 913360 | 45770.0 |
| hypothetical protein | DW869_03610 | Not Available | Negative | 913597 - 914031 | 16502.8 |
| dna-binding protein | DW869_03615 | Not Available | Positive | 914219 - 914719 | 17891.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

