Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxa | DW869_03360 | Not Available | Positive | 858226 - 858828 | 21298.3 |
| hypothetical protein | DW869_03365 | Not Available | Positive | 858970 - 859866 | 33994.2 |
| udp-glucose 4-epimerase gale | DW869_03370 | Not Available | Positive | 859899 - 860933 | 37984.7 |
| lruc domain-containing protein | DW869_03375 | Not Available | Positive | 861227 - 863104 | 71312.8 |
| yitt family protein | DW869_03380 | Not Available | Positive | 863245 - 864135 | 32573.4 |
| aspartate ammonia-lyase | DW869_03385 | Not Available | Positive | 864399 - 865832 | 52225.3 |
| hypothetical protein | DW869_03390 | Not Available | Negative | 865776 - 866081 | 11612.0 |
| hypothetical protein | DW869_03395 | Not Available | Negative | 866053 - 866433 | 14324.3 |
| hypothetical protein | DW869_03400 | Not Available | Negative | 866492 - 867979 | 56303.9 |
| s9 family peptidase | DW869_03405 | Not Available | Negative | 868150 - 870381 | 84409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

