Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2813 domain-containing protein | DW869_03260 | Not Available | Positive | 832476 - 833564 | 41425.4 |
| duf4276 family protein | DW869_03265 | Not Available | Positive | 833571 - 834233 | 25287.4 |
| elongation factor 4 | DW869_03270 | Not Available | Positive | 834353 - 836134 | 66375.4 |
| na+/h+ antiporter nhaa | DW869_03275 | Not Available | Positive | 836266 - 837606 | 48637.6 |
| sensor histidine kinase | DW869_03280 | Not Available | Negative | 837609 - 839882 | 87762.5 |
| amino acid permease | DW869_03285 | Not Available | Negative | 840099 - 841676 | 56506.7 |
| two pore domain potassium channel family protein | DW869_03290 | Not Available | Positive | 841843 - 842577 | 28208.9 |
| transglutaminase domain-containing protein | DW869_03295 | Not Available | Positive | 842659 - 845322 | 99150.9 |
| copper homeostasis protein cutc | DW869_03300 | Not Available | Negative | 845417 - 846280 | 31413.6 |
| glutaminase | DW869_03305 | Not Available | Negative | 846581 - 847543 | 34758.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

