Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_03210 | Not Available | Negative | 822939 - 823253 | 13007.3 |
| n-acetylmuramoyl-l-alanine amidase | DW869_03215 | Not Available | Negative | 823582 - 823998 | 15868.4 |
| dna-binding protein | DW869_03220 | Not Available | Negative | 824258 - 824746 | 17519.0 |
| duf4248 domain-containing protein | DW869_03225 | Not Available | Positive | 825098 - 825316 | 8477.29 |
| quinoprotein amine dehydrogenase | DW869_03230 | Not Available | Negative | 825540 - 826616 | 39489.4 |
| hypothetical protein | DW869_03235 | Not Available | Negative | 826648 - 828723 | 78210.5 |
| replication-associated recombination protein a | DW869_03240 | Not Available | Positive | 828964 - 830241 | 47249.0 |
| d-2-hydroxyacid dehydrogenase | DW869_03245 | Not Available | Positive | 830412 - 831368 | 34358.8 |
| c_gcaxxg_c_c family protein | DW869_03250 | Not Available | Positive | 831412 - 831915 | 18588.2 |
| hypothetical protein | DW869_03255 | Not Available | Positive | 832072 - 832275 | 7433.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

