Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | DW869_03160 | Not Available | Positive | 813545 - 814366 | 32185.9 |
| glycosyltransferase family 4 protein | DW869_03165 | Not Available | Positive | 814371 - 815540 | 44977.2 |
| glycosyltransferase | DW869_03170 | Not Available | Positive | 815554 - 816306 | 29057.5 |
| hypothetical protein | DW869_03175 | Not Available | Positive | 816443 - 817264 | 31261.3 |
| hypothetical protein | DW869_03180 | Not Available | Positive | 817454 - 817669 | 8582.31 |
| putative toxin-antitoxin system toxin component, pin family | DW869_03185 | Not Available | Positive | 817683 - 818090 | 15699.7 |
| hypothetical protein | DW869_03190 | Not Available | Positive | 818198 - 818455 | 9794.74 |
| duf4373 domain-containing protein | DW869_03195 | Not Available | Positive | 818689 - 820317 | 61249.9 |
| dna primase | DW869_03200 | Not Available | Positive | 820314 - 820624 | 12434.4 |
| toprim domain-containing protein | DW869_03205 | Not Available | Positive | 821027 - 822550 | 58031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

