Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease subunit pstc | DW869_03040 | Not Available | Positive | 791539 - 792726 | 42864.7 |
| phosphate abc transporter permease psta | DW869_03045 | Not Available | Positive | 792824 - 793711 | 32091.4 |
| phosphate abc transporter atp-binding protein | DW869_03050 | Not Available | Positive | 793809 - 794561 | 28156.9 |
| phosphate transport system regulatory protein phou | DW869_03055 | Not Available | Positive | 794765 - 795466 | 26759.3 |
| carboxypeptidase-like regulatory domain-containing protein | DW869_03060 | Not Available | Positive | 795868 - 798441 | 99185.7 |
| nucleotidyltransferase | DW869_03065 | Not Available | Positive | 798550 - 798843 | 11121.5 |
| duf86 domain-containing protein | DW869_03070 | Not Available | Positive | 798836 - 799210 | 14517.8 |
| transcriptional regulator | DW869_03075 | Not Available | Positive | 799570 - 800667 | 42361.1 |
| hypothetical protein | DW869_03080 | Not Available | Positive | 800750 - 800947 | 8018.68 |
| hypothetical protein | DW869_03085 | Not Available | Positive | 800941 - 801444 | 19228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

