Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | DW869_02990 | Not Available | Negative | 779889 - 780776 | 32723.6 |
| undecaprenyl-phosphate glucose phosphotransferase | DW869_02995 | Not Available | Negative | 780812 - 782215 | 54181.0 |
| mannose-1-phosphate guanylyltransferase | DW869_03000 | Not Available | Positive | 782329 - 783393 | 40506.4 |
| gdp-mannose 4,6-dehydratase | DW869_03005 | Not Available | Positive | 783569 - 784651 | 41250.6 |
| gdp-l-fucose synthase | DW869_03010 | Not Available | Positive | 784651 - 785727 | 40543.7 |
| thiol peroxidase | DW869_03015 | Not Available | Negative | 785922 - 786425 | 17976.7 |
| deda family protein | DW869_03020 | Not Available | Negative | 786494 - 787120 | 23001.3 |
| tetratricopeptide repeat protein | DW869_03025 | Not Available | Negative | 787128 - 788645 | 59048.9 |
| glutamine--trna ligase/yqey domain fusion protein | DW869_03030 | Not Available | Negative | 788656 - 790395 | 66876.0 |
| psts family phosphate abc transporter substrate-binding protein | DW869_03035 | Not Available | Negative | 790453 - 791271 | 29967.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

