Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW869_02890 | Not Available | Positive | 756427 - 757698 | 46740.6 |
| glycosyl transferase | DW869_02895 | Not Available | Positive | 757714 - 758631 | 35698.8 |
| glycosyltransferase | DW869_02900 | Not Available | Positive | 758652 - 759467 | 31373.7 |
| glycosyltransferase | DW869_02905 | Not Available | Negative | 759485 - 760432 | 36893.3 |
| duf4422 domain-containing protein | DW869_02910 | Not Available | Negative | 760436 - 761260 | 32718.4 |
| acyltransferase | DW869_02915 | Not Available | Negative | 761245 - 761856 | 22980.1 |
| glycosyltransferase family 2 protein | DW869_02920 | Not Available | Negative | 761861 - 763021 | 44269.4 |
| glycosyltransferase | DW869_02925 | Not Available | Negative | 763029 - 764153 | 43064.3 |
| glycosyltransferase family 2 protein | DW869_02930 | Not Available | Negative | 764150 - 765055 | 34487.7 |
| o-antigen ligase domain-containing protein | DW869_02935 | Not Available | Negative | 765036 - 766496 | 54858.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

