Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DW869_02840 | Not Available | Negative | 746182 - 746964 | 31179.2 |
| glycosyltransferase family 4 protein | DW869_02845 | Not Available | Negative | 746961 - 748160 | 46019.9 |
| glycosyltransferase family 1 protein | DW869_02850 | Not Available | Negative | 748121 - 749254 | 43497.6 |
| glycosyltransferase family 4 protein | DW869_02855 | Not Available | Negative | 749251 - 750402 | 44610.8 |
| glycosyltransferase family 4 protein | DW869_02860 | Not Available | Negative | 750399 - 751544 | 44081.2 |
| hypothetical protein | DW869_02865 | Not Available | Positive | 751516 - 751698 | 7023.73 |
| glycosyltransferase | DW869_02870 | Not Available | Positive | 751773 - 752798 | 40606.1 |
| glycosyltransferase family 2 protein | DW869_02875 | Not Available | Negative | 752819 - 753769 | 37137.1 |
| glycosyltransferase family 4 protein | DW869_02880 | Not Available | Positive | 754382 - 755563 | 44909.2 |
| abc transporter permease | DW869_02885 | Not Available | Positive | 755550 - 756413 | 33261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

