Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | DW869_02785 | Not Available | Negative | 734649 - 735434 | 29317.4 |
| [acyl-carrier-protein] s-malonyltransferase | DW869_02790 | Not Available | Negative | 735560 - 736447 | 31271.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DW869_02795 | Not Available | Negative | 736574 - 737398 | 29140.4 |
| sdr family oxidoreductase | DW869_02800 | Not Available | Positive | 737519 - 738457 | 35475.6 |
| endonuclease | DW869_02810 | Not Available | Negative | 739610 - 740671 | 40748.7 |
| hybrid sensor histidine kinase/response regulator | DW869_02815 | Not Available | Negative | 740675 - 742525 | 71115.3 |
| response regulator | DW869_02820 | Not Available | Positive | 742669 - 743025 | 13485.5 |
| glycosyltransferase family 2 protein | DW869_02825 | Not Available | Negative | 743029 - 744234 | 46029.0 |
| glycosyltransferase family 1 protein | DW869_02830 | Not Available | Negative | 744231 - 745349 | 42660.9 |
| glycosyltransferase family 2 protein | DW869_02835 | Not Available | Negative | 745356 - 746198 | 32110.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

