Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | DW869_02735 | Not Available | Positive | 719769 - 721652 | 71341.8 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DW869_02740 | Not Available | Positive | 721678 - 722754 | 39980.6 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW869_02745 | Not Available | Positive | 722778 - 726005 | 119763.0 |
| response regulator | DW869_02750 | Not Available | Positive | 726173 - 728518 | 89808.8 |
| hsp20/alpha crystallin family protein | DW869_02755 | Not Available | Negative | 728759 - 729202 | 16943.0 |
| hypothetical protein | DW869_02760 | Not Available | Negative | 729467 - 729925 | 17636.3 |
| linear amide c-n hydrolase | DW869_02765 | Not Available | Negative | 730160 - 731218 | 39402.4 |
| hypothetical protein | DW869_02770 | Not Available | Negative | 731377 - 731616 | 9468.92 |
| hpaii family restriction endonuclease | DW869_02775 | Not Available | Positive | 731719 - 732807 | 41489.1 |
| alpha-amylase | DW869_02780 | Not Available | Negative | 732936 - 734633 | 64713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

