Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW869_02620 | Not Available | Negative | 687965 - 688207 | 8923.97 |
| glycoside hydrolase family 28 protein | DW869_02630 | Not Available | Positive | 688642 - 690048 | 52445.8 |
| gtp-binding protein | DW869_02635 | Not Available | Negative | 690112 - 691362 | 47708.0 |
| alpha-l-fucosidase | DW869_02640 | Not Available | Positive | 691511 - 692836 | 50388.9 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 693017 - 693411 | Not Available |
| lactonase family protein | DW869_02650 | Not Available | Positive | 693552 - 694718 | 42682.8 |
| mannose-6-phosphate isomerase | DW869_02655 | Not Available | Negative | 694810 - 695781 | 36199.5 |
| hypothetical protein | DW869_02660 | Not Available | Negative | 695895 - 697472 | 56712.6 |
| tonb-dependent receptor | DW869_02665 | Not Available | Negative | 697509 - 700274 | 104480.0 |
| low specificity l-threonine aldolase | DW869_02670 | Not Available | Positive | 700440 - 701456 | 37852.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

